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FASTA statistics FASTAStatistics 0.3.0

atom · category transform · maturity 1 · origin core · src/atomic/fasta/FASTAStatistics.js

Computes record count, length summary and residue frequencies of a FASTA stream as table rows: a summary table and, optionally, one row per record.

Ports

Inputs

  • in: FASTA.Entry

Outputs

  • summary: Table.Row
  • records: Table.Row

Parameters

NameLabelTypeDefaultDescription
perSectionEmit one row per record (header, length, residue counts)booleantrue

Credits

Software
Jens Allmer

Publications

No publications declared.

Used in articles

0 reviewed, 1 unreviewed

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